DatasetT11b high vs low squamous_GSEA_Ranked
PhenotypeNoPhenotypeAvailable
Upregulated in classna_pos
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)0.4903665
Normalized Enrichment Score (NES)2.687352
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Cxcl5163.9740.0519Yes
2Il1a442.8120.0847Yes
3C3ar1462.7950.1237Yes
4Cybb572.6540.1585Yes
5Mxd1692.5270.1913Yes
6Msr1782.3910.2229Yes
7Serpine1892.2950.2526Yes
8Csf3r1132.0520.2758Yes
9Emp31152.0200.3039Yes
10Il1b1291.9120.3275Yes
11Abca11721.7160.3412Yes
12Ptafr1911.6260.3596Yes
13Cdkn1a1921.6250.3824Yes
14Cxcl152381.4700.3919Yes
15Lamp32981.3070.3956Yes
16Itga53201.2120.4075Yes
17Gna153261.1970.4230Yes
18Slc7a23701.1140.4280Yes
19Irf13721.1110.4434Yes
20Plaur4261.0120.4445Yes
21Tnfrsf1b4630.9550.4489Yes
22Nfkb14860.9180.4564Yes
23Stab15230.8730.4597Yes
24Rgs15260.8730.4715Yes
25Pdpn5440.8500.4792Yes
26Irf75480.8470.4904Yes
27Sphk16720.6910.4696No
28Hif1a6840.6830.4764No
29P2rx47070.6630.4803No
30Lcp28400.5700.4556No
31Kif1b9230.5180.4425No
32Raf19420.5100.4452No
33Rela9430.5090.4524No
34Nfkbia9540.5020.4569No
35Sri1116-0.5250.4244No
36Hbegf1222-0.5440.4060No
37Aplnr1378-0.5700.3755No
38Ptger41845-0.6600.2692No
39Ly6e1857-0.6630.2758No
40Il151933-0.6810.2668No
41Gpc32218-0.7430.2068No
42Scn1b2310-0.7640.1949No
43Pvr2314-0.7660.2050No
44Slc31a12408-0.7930.1931No
45Calcrl2591-0.8450.1598No
46Tnfsf102592-0.8450.1717No
47Slc4a42622-0.8540.1765No
48Il18r12742-0.8870.1594No
49Ahr2936-0.9530.1249No
50Selenos2961-0.9600.1325No
51Cd822976-0.9650.1426No
52Gabbr12985-0.9690.1542No
53Il183078-1.0100.1456No
54Psen13136-1.0340.1460No
55Tlr23387-1.1560.1002No
56Ccl173767-1.4560.0266No
57Hpn3768-1.4560.0471No
58Ereg4031-2.2970.0144No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE